# Radiation Datasets # U95AV2 GPL8300 # GDS968 (171 samples, Rieger Tibs, MAS4, with skin cancer) # GDS913 (45 samples, mock, IR, UV, no cancer) # GDS1887 (46 samples, rectal cancer preop IR), # GDS725/GSE770 (10 samples, alex, to 24 hrs, LNCAPs, 10 Gy *** # GDS400 (20 sample 24 hr response to 10 and 50 J/m2) *** # U133A GPL96 # GDS3471 (44 pre and 8h post 5Gy, resist or not lymphos # GDS3125 (18 pre and 5h & 24h post IR, resist or not squams # GDS3124 12 resist or not, IR + -, dose and post IR time not stated # low doses, 30 1-10 cGy GSE22639, Wyrobek, or GSE6978 114 spotted # U133A 2 GPL 571 # GSE12626 (465 samples, 0, 2 & 6 h post 10 Gy, with SNPs, Cheung # GSE23120 (287 samples, with SNPs and radiation sens data # GSE671 (84 samples, HNC HPV or not & CC, one shot) # U133 plus 2 # GSE13662 8 zalypsis makes DSBs/gH2AX in p53+ # 1.0ST GENE # GSE20549(44 sample, lung, 2Gy, resist or not, 0, 4, 8, 12 & 24 hours # cDNDA #GSE3174 1, 5 Gy at 6 h, ATM+GM02254 and -GM02782, what other diffs? # GSE10744 14 HNSCC p53 + or not # Agilent # GSE6971 ATM, 1.5 Gy, 0,2,6 & 24 h (20k 60mer) # GSE13886 13 RKO and HCT113 p53 + or not # GSE8993 carbon ions, bystander effects # GSE18760 12 alpha bystander, 30 min, 4 reps, lung fibros,sally # GSE14466 12 G0 fibro and keratinos .1 1 5 Gy, GPL1708 # GEhealthCare GPL2895 # GSE6630 108 arrays, C ions and X-rays, 0, 2 Gy, 1h 3h # GSE12647 9 miRNA 0, .1 & 2 Gy, .5, 6 and 24 h. # gemcitabine # GDS2777 20 samples, with bex (differentiates) and gem resist or not # GDS1688 29 samples, lung, gem and 5FU cell killing correlations #NCI-60 # GSE22821 64 agilent 21k genes,8/2010, GPL1290 # GSE2520 128 100K SNP chips # GSE5949 300 u95a-e GPL91 # GSE5846 60 u133 GPL96 # GSE7505 64 cDNA arrays with IR response # p53 # GSE3494 502 U133A&B breast CA, grade ER and p53 status # GSE18971 48 nutlin CLL agilent 4x44 # GSE3178 48 +/- p53-RNAi, +/-dox/adria Agilent 1A gpl887 # GSE12553 32 +/- p53 shRNAi, +/-HPV,+-miR372 Agilent 4x44 gpl4133 # GSE15440 31 +- MDM2 esiRNA doxo/adria # GDS1852 30 +- relA, p53 and ATM siRNA, HG Focus GPL201 # GSE4482 29 cerv ca (spotted custom) # GDS846 19 HMEC 5FU and dox time course, 12, 24 36 h UNC spotted