This package automatically generates and selects equilibrium models using as outputs either average protein mass data or enzyme reaction rate data. It is currently limited to systems where one central hub protein mediates all of the interactions and total concentrations of the reactants are approximately known exactly, e.g. as in systems that were reconstituted from purified reactants. It is limited further in that multiple sites for the same ligand must be filled in a predetermined sequence.
The package is available as a binary zip file for windows here and as a standard source file for linux here. Package use in windows is limited to learning from interactive pilot sessions. The intended use of this package is on a ROCKS cluster with many cpus.
Website maintained by Tom Radivoyevitch .